Book Chapters

1.Yasheng Chen, Yu-Ping Wang and A. A. Amini, "Tagged MRI Image Analysis from Splines", chapter 8, Measurement of Cardiac Deformation from MRI: Physical and Mathematical Models, eds. A.A Amini and J.L. Prince, Kluwer Academic Publishers, 2001. [PDF file]

2.Yu-Ping Wang, Chapter 5 in Wavelet Theory and Its Applications, Xidian University Press, China, 1993.

3. Chris Wyat, Yu-Ping Wang, Merray Loew, and Yue Wang, Medical Imaging enhancement, invited book chapter 7, Biomedical Information Technology, in Elsevier-Academic Press Series in Biomedical Engineering, 2007.

 

4. Yu-Ping Wang, Qiang Wu, and Ken Castleman, Microscopic image enhancement, invited Book Chapter of Microscopic Image Analysis, edited by Qiang Wu, Fatima Merchant and Ken Castleman, in Elsevier-Academic Press, 2007. 

Journal publications

1. Yu-Ping Wang, Multiscale Genomic Imaging Informatics, IEEE Signal Processing Magazine, Nov.-Dec. issue, 2009.

 

2. Jie Chen and Yu-Ping Wang, A statistical model-based approach for the identification of DNA copy number changes in array CGH datasets, IEEE Trans. Computational Biology and Bioinformatics, Oct-Dec issue, 2009.

3. Ranganathan Parthasarathy, Ganesh Thiagarajan, Xiaomei Yao, Yu-Ping Wang, Paulette Spencer and Yong Wang, Application of Univariate and Multivariate Analyses in Micro-Raman Imaging to Unveil Structural/Chemical Features of the Adhesive/Dentin Interface, J. of Biomedical Optics, 13(1), 2008.

4. Yu-Ping Wang, M. Gunampally, J. Chen, D. Bittel, M. Butler and W.-W. Cai, A Comparison of Fuzzy Clustering Approaches for Quantification of Microarray Gene Expression, Journal of VLSI Signal Processing Special Issue on Machine Learning for Microarray and Sequence Analysis, May, 2007.

5. Yu-Ping Wang, Husain Ragib and Chi-Ming Huang, A wavelet approach for the identification of axonal synaptic varicosities from microscope images, IEEE Trans. Information Techniques in Biomedicine, May, 11(7): 296-304, 2007.

6. Yu-Ping Wang and Ashok DandpatA Hybrid Approach of Using Wavelets and Fuzzy Clustering for Classifying Multi-spectral Florescence in Situ Hybridization Images, Int. Journal of Biomedical Imaging, vol. 2006, pp. 1-11, 2006.

7.  P.Sivakumar, A.Czirok, B.J.Rongish, V.P.Divakara, Y.-P.Wang and S.L.Dallas, New Insights into Extracellular Matrix Assembly and Reorganization from Dynamic Imaging of Extracellular Matrix Proteins in Living Osteoblasts, Journal of Cell Science, 119:1350-1360, 2006.

8. Huang, C. Titus, J.A. Wang, Y. and Huang, R.  Information Coding Capacity of Cerebellar Parallel Fibers, Brain Research Bulletin, 70(1), Pages 49-54, 2006.

9. Yu-Ping Wang, Y. Wang and P. Spencer, Fuzzy Clustering of Raman Spectral Imaging Data with a Wavelet-Based Noise Reduction Approach, Applied Spectroscopy, 60(7), 2006.

10. Yu-Ping Wang and Ken Castleman, Automated Registration of Multi-Color Fluorescence In Situ Hybridization (M-FISH) Images for  Improving Color Karyotyping,  Cytometry, Part A, 64A(2), April, 2005. [PDF file].

11. Yu-Ping Wang, J. Chen, Q. Wu and Ken Castleman, Fast frequency estimation by zero-crossings of differential spline wavelet transform, EURASIP Journal on Applied Signal Processing, 2005(8): 1251-1260, May, 2005 [PDF file].

12. Yu-Ping Wang and Wei-Wen Cai, Genetic imaging: where imaging science meets cytogenetic research,  Biophotonics Magazine, Nov.,  2004 [PDF file].

13. Yu-Ping Wang, Q. Wu, Ken. Castleman, Z. Xiong , Chromosome Image Enhancement Using Multiscale Differential Operators , IEEE Trans. Medical Imaging, vol. 22, no.5, May, 2003.[PDF file], [ Demo link ].

14. Z. Liu, Z. Xiong, Q. Wu, Y. Wang, and K. Castleman, Cascaded differential and wavelet compression of chromosome images, IEEE Trans. on Biomedical Engineering, vol. 49, no. 4, 2002. [PDF file]

15. Yu-Ping Wang, Y. Chen, A. A. Amini, Efficient LV Motion Estimation using Subspace Approximation Techniques, IEEE Trans. Medical Imaging, vol. 20, no.6, June 2001.[PDF file]

16. Yu-Ping Wang, S. L. Lee, Scale-space derived from B-splines, IEEE Trans. Pattern Analysis and Machine Intelligence, vol. 20, no. 10, Oct. 1998, pp.1050-1065. [PDF file]

17. Yu-Ping Wang, Qu Ruibin, Initialization and inner product computation of wavelet transform using interpolatory subdivision scheme, IEEE Trans. Signal Processing, vol. 47, no. 3, p. 817, 1999. [PDF file]

18. Yu-Ping Wang, S. L. Lee, K. Torachi, Multiscale curvature based shape representation using B-spline wavelets, IEEE Trans. Image Processing, vol. 8, no 11, 1999. pp. 1586-1592. [PDF file]

19. Yu-Ping Wang, Image representations using multiscale differential operators, IEEE Trans. Image Processing, vol. 8, no. 12, 1999, pp. 1757-1771.[PDF file]

20. Yu-Ping Wang, Qu Ruibin, Fast implementation of scale-space by interpolatoy subdivision scheme, IEEE Trans. Pattern Analysis and Machine Intelligence, vol. 21, no. 9, 1999 pp.1050-1065. [PDF file]

21. Jun-Feng Guo, Yuan-Long Cai, Yu-Ping Wang, "Morphology-Based Interpolation for 3-D Medical Image Reconstruction," Computerized Medical Imaging and Graphics, vol.19, no.3, pp. 267-279, 1995. [PDF file]

22. Yu-Ping Wang and Gui-Zhong Liu, "Computation of Continuous Wavelet Transform by Interpolation," Journal of Electronic Science and Technology, no.3. pp. 42-44, September 1993.

23. Long Gong ,Yu-Ping Wang and Zheng Tan, "A Zero-Crossing Edge Detection Operator with Variable Scale and Orientation," Journal of Data Acquisition and Processing, vol.10, no.3, pp.175-180, 1995.

24. Jin-Feng Guo, Yuan-Long Cai and Yu-Ping Wang, "Investigation of Interpolation Methods for Medical 3D Reconstruction," Computerized Tomography: Theory and Applications, vol.3, no.4, pp. 7-11, 1994.

25. Chao-Wei Yuan, Zhao-Yong You and Yu-Ping Wang, "A Novel Algorithm of Inverse Radon Transform," J. of Electronic Science and Technology, No.3. pp. 49-54, September 1993.

26. Yu-Hua Peng,Ya-Xun Liu,Yu-Ping Wang, Wen-Bing Wang, "The Application Of Wavelet Transform to Time-Frequency Analysis of Electromagnetic Backscatter Signals," Acta Electronica Sinica, vol.23, no.9, pp.109-111,1995.

27. Yu-Ping Wang, Yuan-Long Cai, Zhong-xing Geng and Rui Feng, "Application of Wavelet Packet Transform to Seismic Signal Processing," to appear in Acta Seismology Sinica, 1995.

28. Yu-Ping Wang and Yuan-Long Cai, "A Type of B-Spline Wavelet and the Associated Fast Algorithms," to appear at Signal Processing (Chinese).

29. Jiehui Yuan, Yu-Ping Wang, and Yuan-Long Cai, The Modeling and Extraction of Visual Primary Components in Images", China journal of Image and Graphics, Vol.2, No.8-9, pp.594-598, Sep. 1997.

30. Yu-Ping Wang, "A Wavelet is Creating Great Waves," Science (Chinese), vol.47, no.4, 1995.

31. Yu-Ping Wang, Yuan-Long Cai and Jun-Feng Guo, "Construction of Wavelet Packet Bases and Their Properties," Journal of Xi'an Jiaotong University, vol.29, no.4, pp. 26-31, 1995.

32. Yu-Ping Wang and Yuan-Long Cai, "Multiscale B-Spline Wavelet for Edge Detection," Science in China, Ser. A, Vol.38, No.4, pp. 499-512, 1995.

33. Yu-Ping Wang and Yuan-Long Cai, "An Overview of Wavelet Transform to Signal Processing," Radio Engineering, vol.24, no.3, pp. 11-19, 1994.

34. Yu-Ping Wang and Yuan-Long Cai, "Filtering Based on Wavelet Transform," Information and Control, 1996.

Conference papers  (selected)

1. Yu-Ping Wang, Maheswar Gunampally, Jie Chen Douglas Bittel, Merlin G. Butler and Wei-Wen Cai, Accurate Quantification of Gene Expression using Fuzzy Clustering Approaches, Proceedings of the IEEE International Workshop on Genomic Signal Processing (GENSIPS'07), Gustavelund, Tuusula, Finland, June 10-12, 2007.

 

2. Yu-Ping Wang, Classification of Multi-color Fluorescence In Situ Hybridization (M FISH) Images with Multi-Spectral Wavelet Representations, IEEE 7th International Symposium on Bioinformatics & Bioengineering (IEEE BIBE 2007), in Boston, Oct. 14-17.

 

3. Yu-Ping Wang, Identification of amplifications and deletions in array CGH data using a differential wavelet analysis, IEEE 7th International Symposium on Bioinformatics & Bioengineering (IEEE BIBE 2007), in Boston, Oct. 14-17.

 

4. Fazel A., Derakhshani R., and Wang Y., “Classification of Multicolor Fluorescence In Situ Hybridization Images using Gaussian Mixture Models”, Proceedings of ANNIE 2006 Conference, St. Louis, MO, 2006.

 

5. J. Chen and Yu-Ping Wang, Detection of DNA copy number changes using statistical change point analysis, Proceedings of the IEEE International Workshop on Genomic Signal Processing 2006, May, College Station, TX.

 

6. Yu-Ping Wang and Ashok Dandpat,  Classification of Multi-spectral Florescence in Situ Hybridization Images with Fuzzy Clustering and Multiscale Feature Selection, Proceedings of the IEEE International Workshop on Genomic Signal Processing 2006, May, College Station, TX.

 

7. Yu-Ping Wang, Y. Wang and P. Spencer, A differential wavelet-based noise reduction approach to improve the clustering of hyperspectral Raman imaging data, 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, April 6-9, Arlinton, VA, 2006. 

 

8.Yu-Ping Wang, Maheswar Reddy Gunampally and Wei-Wen Cai, Automated segmentation of microarray spots using fuzzy clustering approaches, 2005 IEEE International Workshop on Machine learning for signal processing, September 28 - 30, Mystic, Connecticut. Special Session on machine learning for genomic signal processing, invited paper. 

 

9. Yu-Ping Wang, Ragib Husain,, Chi-Ming Huang, Automated recognition of synaptic varicosities from microscope,  2005 IEEE International Workshop on Machine learning for signal processing, September 28 - 30, Mystic, Connecticut.  

 

10.Yu-Ping Wang, Wavelets meet genetic Imaging, Proceedings of SPIE Vol. #5914, conference on Wavelets XI, San Diego, July 31-Aug3, 2005. Invited keynote talk.

 

11.Yu-Ping Wang, Fast Frequency estimation using spline wavelets, Proceedings of SPIE Vol. #5914, conference on Wavelets XI, San Diego, July 31-Aug. 3, 2005.  

 

12.Yu-Ping Wang and Ashok Kumar Dandpat, “Segmentation of chromosome regions from multi-color fluorescence in situ hybridization images by fuzzy clustering approaches”, Proceedings of the IEEE International Workshop on Genomic Signal Processing 2005, May, Newport, RI. 

 

13.Yu-Ping Wang, A. Dandpat and K. Castleman, Classification of M-FISH Images using Fuzzy C-means Clustering Algorithm and Normalization Approaches, Asilomar Conferences on Signals, Systems and Computers, 7-10, Nov., 2004. invited paper.

 

14.Yu-Ping Wang, M-FISH image registration and classification, 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, April, Arlinton, VA, 2004. invited paper.   

 

15. Wu, Q., T. Chen, X. Li, Y. Wang and K.R. Castleman, "A Multiresolution Autofocusing Method for Automated Microscopy", Microscopy & Microanalysis, San Antonio, TX, Aug. 2003.

 

16. Yu-Ping Wang, Q. Wu, K. Castleman, and Z. Liu, Fast filter bank implementation of image interpolation at any scales, 2002 International Conference on Acoustics, Speech and Signal Processing, Orlando, FL, May 13-17, 2002.

17. Wu, Q., Z. Liu, Z. Xiong, Y. Wang, T. Chen and K. R. Castleman, "On optimal subspaces for appearance-based object recognition", 2002 International Conference on Image Processing , Rochester, NY, USA, 2002.

18. Wu, Q., Y. Wang,, Z. Liu, T. Chen and K. R. Castleman, "The effect of image enhancement on biomedical pattern recognition", Second Joint IEEE EMBS-BMES Conference, Houston, Oct. 23-26, TX, 2002.

19. Yu-Ping Wang, Q. Wu, K. Castleman, and Z. Xiong, Image enhancemnent using multiscale differential operators, 2001 International Conference on Acoustics, Speech and Signal Processing, Salt Lake City, UT, May, 2001.

20. Z. Liu, Q. Wu, Z. Xiong, Y. Wang, and K. Castleman, Cascaded differential and wavelet compression of chromosome images, to appear in Proc. SPIE Symposium on Optical Science and Technology, San Diego, CA, August 2001.

21. Yu-Ping Wang, A. A. Amini, Fast techniques for determining Myocardial Strains from Tagged MRI, World Congress on Medical Physics and Biomedical Engineering, June 2000, Chicago IL.

22. Yu-ping Wang, S. L. Lee, A general framework for multiscale image representations using B-splines, invited paper, 2000 European Signal Processing Conference.

23.Wu Qiang, Xiong Zixiang, Ken Castelman, Yu-Ping Wang, Wavelet Based Lossless Coding of Cytogenetic Images with Arbitrary Regions of Support, 2000 IEEE International symposium on Intelligent Signal Processing and Communication Systems. Honolulu, HI, November 2000.

24.Yu-ping Wang, Multiscale Image Representations from B-splines, Lecture notes. A talk based on this has been given at Washington University, Univ. of Penn., Texas A&M, 2000. 

25. Yu-Ping Wang, Q. Wu, K. Castleman, and Z. Xiong, Image enhancement using multiscale oriented wavelets, 2001 International Conference on Image Processing, Thessaloniki, Greece, October 7-10, 2001.

26. Peng-Ling He, Yu-Ping Wang and Yi-Jun Liang, "B-Spline Contour Fitting and Transform Representation for Computer Vision," Europe-China Workshop On Geometric Modeling and Invariants for Computer Vision, Xi'an, China, April 1995.

27. Yu-Ping Wang and Yuan-Long Cai, "Construction and Properties of B-Spline Wavelet Filters for Multiscale Edge Detection," in Proc.IEEE International Conference on Image Processing, Washington, D.C., U.S.A., October 1995.

28. Yu-Ping Wang, "The Construction and Properties of Wavelet Packet Bases," Proceedings of International Conference on Neural Network and Signal Processing, Guangzhou, China, 1993.

29. Yu-Ping Wang and Gui-Zhong Liu, "Application of Wavelet Transform to the Time-Varying Filtering of Seismic Signals," Presented at the Western Oil Exploration Conference in China, September 1993.

30. Yu-Ping Wang and Gui-Zhong Liu, "Reconstruction of Images from Its Projections by Wavelet Transform," Proc. of 4th National CTConference, Beijing, China, October 1992.

31. Yu-Ping Wang and Yuan-Long Cai, Peng-Ling He, "A Family of Multiscale B-Spline Wavelet Transforms," in Proceedings of International Conference on Neural Network and Signal Processing, Nanjing, China, 1995.

32. Gui-Zhong Liu, Shuang-Liang Di and Yu-Ping Wang, "Nonorthogonal Wavelet Packet Transform," National Conference on Neural Network, Xi'an, China, October 1993.

33. Yu-Ping Wang, and Sheng-Wang Zhu, "Filtering the Random Seismic Noise Using Multiscale B-spline wavelet," Technical reports.

34. Yu-Ping Wang, "Wavelet Theory and its Potential Application to 3-D Computer Vision," Procedings of Mathematical Research in Celebrating 100th anniversary of Tianjin University (Peiyang University), Oct., 1995.

35. Yu-Ping Wang, Yuan-long Cai, "Multiscale B-Spline Theory and its Application to Computer Vision," Technical reports, 1996.

36. Yu-Ping Wang, and S. L. Lee, From Gaussian Scale-space to B-spline Scale-space, 1999 International Conference on Acoustics, Speech and Signal Processing, Phonix, AZ, May 2001.

37. Yu-Ping Wang, A family of multi-orientation wavelet transforms and the comparison with the Radon transform, Technical report, Dec., 1997.

38. Yu-Ping Wang, A. A. Amini, Fast computation of tagged MRI motion fields with subspace approximation techniques, IEEE workshop on Mathematical Methods in Biomedical Image Analysis 2000